Fennoscandian phylogeography of the common shrew Sorex araneus. Postglacial recolonisation - combining information from chromosomal variation with mitochondrial DNA data

• Autorzy: Lundqvist A. C. , Alstrom-Rapaport C. , Tegelstrom H.
• Języki publikacji: EN

Abstrakty

EN

We examine mtDNA variation of the common shrew in Fennoscandia to explore the incongruence found in previous studies using chromosomal and mitochondrial markers, aiming to reveal post-glacial recolonisation patterns. A total of 241 common shrews from 51 localities in Fennoscandia were analysed. This area includes a secondary contact zone between two groups (the Northern group and the Western group) showing distinct karyotypes. All individuals were sequenced for 447 bp of the mitochondrial control region. No significant differentiation in the mtDNA variation was observed between the two major chromosomal groups in Fennoscandia. The star-like shape of the sequence network for the entire study area shows the most common haplotype A as ancestral in all regions but one, in situ formation of most haplotypes and population expansion. The only significant mtDNA structure observed occurs between south Finland and the rest of Fennoscandia. We propose that the Northern and Western group shared a common refugium during the Last Glacial Maximum but recolonised Fennoscandia via two routes. Karyotypic differences between south and north Finland has led researchers to suggest that both regions originate from the same ancestral population east of Finland. The observed divergence of mtDNA variation between these two regions supports this hypothesis.

• Wydawca: -
• Czasopismo: Acta Theriologica
• Rocznik: 2011
• Tom: 56
• Numer: 2
• Opis fizyczny: p.103-116,fig.,ref.

Twórcy

autor

Lundqvist A. C.

• Evolutionary Functional Genomics, Department of Evolution, Genomics and Systematics, EBC, Uppsala University, Norbyvagen 18 D, 752 36 Uppsala, Sweden

autor

Alstrom-Rapaport C.

• Faculty of Architecture and Planning, Dalhousie University, School of Planning, P.O. Box 1000, Halifax, NS B3J 2x4, Canada

autor

Tegelstrom H.

• Conservation Biology and Genetics, EBC, Uppsala University, Uppsala, Sweden

Bibliografia

• Andersen BG, Borns HW Jr (1997) The ice age world. Scandinavian University Press, Oslo
• Andersson A-C, Narain Y, Tegelström H, Fredga K (2004) No apparent reduction of gene flow in a hybrid zone between the West and North European karyotypic groups of the common shrew, Sorex araneus. Mol Ecol 13:1205–1215. doi:10.​1111/​j.​1365-294X.​2004.​02146.​x
• Andersson A-C, Alström-Rapaport C, Fredga K (2005) Lack of mitochondrial DNA divergence between chromosome races of the common shrew, Sorex araneus, in Sweden. Implications for interpreting chromosomal evolution and colonization history. Mol Ecol 14:2703–2716. doi:10.​1111/​j.​1365-294X.​2005.​02584.​x
• Aris-Brosou S, Excoffier L (1996) The impact of population expansion and mutation rate heterogeneity on DNA sequence polymorphism. Mol Biol Evol 13:494–504
• Bandelt H-J, Forster P, Röhl A (1999) Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol 16:37–48
• Bilton DT, Mirol PM, Mascheretti S, Fredga K, Zima J, Searle JB (1998) Mediterranean Europe as an area of endemism for small mammals rather than a source of northwards postglacial colonization. Proc R Soc B 265:1219–1226. doi:10.​1098/​rspb.​1998.​0423
• Björck S (1995) A review of the history of the Baltic Sea, 13.0–8.0 ka BP. Quat Int 27:19–40. doi:10.​1016/​1040-6182(94)00057-C
• Brunhoff C, Galbreath KE, Fedorov VB, Cook JA, Jaarola M (2003) Holarctic phylogeography of the root vole (Microtus oeconomus): implications for late Quaternary biogeography of high latitudes. Mol Ecol 12:957–968. doi:10.​1046/​j.​1365-294X.​2003.​01796.​x
• Brunhoff C, Yoccoz NG, Ims RA, Jaarola M (2006) Glacial survival or late glacial colonization? Phylogeography of the root vole (Microtus oeconomus) in north-west Norway. J Biogeogr 33:2136–2144. doi:10.​1111/​j.​1365-2699.​2006.​01573.​x
• Brünner H, Turni H, Kapischke H-J, Stubbe M, Vogel P (2002) New Sorex araneus karyotypes from Germany and the postglacial recolonization of central Europe. Acta Theriol 47:277–293
• Carlsson M, Tegelström H (2002) The phylogeography of adders (Vipera berus) from Fennoscandia. In: Schuett GW, Höggren MH, Douglas ME, Greene HW (eds) Biology of the vipers. Eagle Mountain, Sandy, pp 1–9
• Eronen M, Glückert G, Hatakka L, van de Plassche O, van der Plicht J, Rantala P (2001) Rates of Holocene isostatic uplift and relative sea-level lowering of the Baltic in SW Finland based on studies of isolation contacts. Boreas 30:17–30. doi:10.​1080/​0300948013000622​48
• Excoffier L, Smouse P, Quattro J (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial restriction data. Genetics 131:479–491
• Fedorov VB, Jaarola M, Fredga K (1996) Low mitochondrial DNA variation and recent colonization of Scandinavia by the wood lemming Myopus schisticolor. Mol Ecol 5:577–581. doi:10.​1046/​j.​1365-294X.​1996.​00112.​x
• Fredga K (1996) The chromosome races of Sorex araneus in Scandinavia. Hereditas 125:123–135. doi:10.​1111/​j.​1601-5223.​1996.​00123.​x
• Fredga K (2003) Chromosome races of Sorex araneus in Norway. Description of two new races. Mammalia 68:179–185. doi:10.​1515/​mamm.​2003.​67.​2.​179
• Fredga K, Narain Y (2000) The complex hybrid zone between the Abisko and Sidensjö chromosome races of Sorex araneus in Sweden. Biol J Linn Soc 70:285–307. doi:10.​1111/​j.​1095-8312.​2000.​tb00211.​x
• Fumagalli L, Taberlet P, Favre L, Hausser J (1996) Origin and evolution of homologous repeated sequences in the mitochondrial DNA control region of shrews. Mol Biol Evol 13:31–46. doi:10.​1093/​molbev/​msq141
• Fumagalli L, Taberlet P, Stewart DT, Gielly L, Hausser J, Vogel P (1999) Molecular phylogeny of Sorex shrews (Soricidae: Insectivora) inferred from mitochondrial DNA sequence data. Mol Phylogenet Evol 11:222–235. doi:10.​1006/​mpev.​1998.​0568
• Halkka L, Söderlund V, Skarén U, Heikkilä JH (1987) Chromosomal polymorphism and racial evolution of Sorex araneus L. in Finland. Hereditas 106:257–276
• Halkka L, Kaikusalo A, Vakula N (1994) Revision of Sorex araneus L. chromosome nomenclature, and race N new to Finland. Ann Zool Fenn 31:283–288
• Hausser J, Fedyk S, Fredga K, Searle JB, Volobouev V, Wójcik JM, Zima J (1994) Definition and nomenclature of the chromosome races of Sorex araneus. Folia Zool 43(suppl 1):1–9
• Haynes S (2000) The history of wild and domesticated vertebrates deduced from modern and ancient DNA sequences. Ph.D. thesis, University of York, York
• Hewitt GM (1999) Post-glacial re-colonisation of European biota. Biol J Linn Soc 68:87–112. doi:10.​1111/​j.​1095-8312.​1999.​tb01160.​x
• Ignatius H, Korpela K, Kujansuu R (1980) The deglaciation of Finland after 10,000 B.P. Boreas 9:217–228. doi:10.​1111/​j.​1502-3885.​1980.​tb00698.​x
• Jaarola M, Searle JB (2002) Phylogeography of field voles (Microtus agrestis) in Eurasia inferred from mitochondrial DNA sequences. Mol Ecol 11:2613–2621. doi:10.​1046/​j.​1365-294X.​2002.​01639.​x
• Jaarola M, Tegelström H (1995) Colonization history of North European field voles (Microtus agrestis) revealed by mitochondrial DNA. Mol Ecol 4:299–310. doi:10.​1111/​j.​1365-294X.​1995.​tb00223.​x
• Jaarola M, Tegelström H (1996) Mitochondrial DNA variation in the field vole (Microtus agrestis): regional population structure and colonisation history. Evolution 50:2073–2085
• Jaarola M, Tegelström H, Fredga K (1999) Colonization history in Fennoscandian rodents. Biol J Linn Soc 68:113–127. doi:10.​1111/​j.​1095-8312.​1999.​tb01161.​x
• Jadwiszczak KA, Ratkiewicz M, Banaszek A (2006) Analysis of molecular differentiation in a hybrid zone between chromosomally distinct races of the common shrew Sorex araneus (Insectivora: Soricidae) suggests their common ancestry. Biol J Linn Soc 89:79–90. doi:10.​1111/​j.​1095-8312.​2006.​00659.​x
• Jánossy D (1986) Pleistocene vertebrate faunas of Hungary. Developments in palaeontology and stratigraphy, vol. 8. Elsevier, Amsterdam
• Kazantseva NE, Smirnov AK, Markova NG, Kozharinov AV, Simakova AN, Kitaev LM (1995) Late Pleistocene distribution and diversity of mammals in northern Eurasia (PALEOFAUNA Database). Paleoantol Evol 28–29:5–114
• Mes THM (2003) Demographic expansion of parasitic nematodes of livestock based on mitochondrial DNA regions that conflict with the infinite-sites model. Mol Ecol 12:1555–1556. doi:10.​1046/​j.​1365-294X.​2003.​01846.​x
• Miller SA, Dykes DD, Polesky HF (1988) A simple salting procedure for extracting DNA from human nucleated cells. Nucleic Acids Res 16:215. doi:10.​1093/​nar/​16.​3.​1215
• Nadachowski A (1989) Origin and history of the present rodent fauna in Poland based on fossil evidence. Acta Theriol 34:37–53
• Narain Y, Fredga K (1996) A hybrid zone between the Hällefors and Uppsala chromosome races of Sorex araneus in central Sweden. Hereditas 125:137–145
• Nordal I, Jonsell B (1998) A phylogeographic analysis of Viola rupestris: three post-glacial immigration routes into the Nordic area? Biol J Linn Soc 128:105–122. doi:10.​1111/​j.​1095-8339.​1998.​tb02110.​x
• Pamilo P, Nei M (1988) Relationships between gene trees and species trees. Mol Biol Evol 5:568–583
• Peakall R, Smouse PE (2006) GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Mol Ecol Notes 6:288–295. doi:10.​1111/​j.​1471-8286.​2005.​01155.​x
• Polyakov AV, Zima J, Searle JB, Borodin PM, Ladygina T (2000) Chromosome races of the common shrew Sorex araneus L. in the Ural Mts: a link between Siberia and Scandinavia? Acta Theriol 47(suppl 1):19–26
• Polyakov AV, Panov VV, Ladygina TY, Bochkarev MN, Rodionova MI, Borodin PM (2001) Chromosomal evolution of the common shrew Sorex araneus L. from the Southern Urals and Siberia in the postglacial period. Russ J Genet 37:351–357. doi:10.​1023/​A:​1016690023394
• Ratkiewicz M, Fedyk S, Banaszek A, Gielly L, Chetnicki W, Jadwiszczak K, Taberlet P (2002) The evolutionary history of two karyotypic groups of the common shrew, Sorex araneus in Poland. Heredity 88:235–242. doi:10.​1038/​sj.​hdy.​6800032
• Remington CL (1968) Suture zones of hybrid interaction between recently joined biotas. Evol Biol 2:321–428
• Rozas J, Rozas R (1999) DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15:174–175. doi:10.​1093/​bioinformatics/​15.​2.​174
• Schneider S, Roessli D, Excoffier L (2000) Arlequin ver. 2.000: a software for population genetics data analysis. Genetics and Biometry Laboratory, University of Geneva, Switzerland
• Searle JB (1984) Three new karyotypic races of the common shrew Sorex araneus (Mammalia: Insectivora) and a phylogeny. Syst Zool 33:184–194
• Searle JB, Wójcik JM (1998) Chromosomal evolution: the case of Sorex araneus. In: Wójcik JM, Wolsan M (eds) Evolution of shrews. Mammal Research Institute, Polish Academy of Sciences, Bialowieza, pp 219–268
• Shields GF, Kocher TD (1991) Phylogenetic relationships of North American ursids based on analysis of mitochondrial DNA. Evolution 45:218–221
• Simonsen KL, Churchill GA, Aquadro CF (1995) Properties of statistical tests of neutrality for DNA polymorphism data. Genetics 141:413–429
• Southern SO, Southern PJ, Dizon AE (1988) Molecular characterization of a cloned dolphin mitochondrial genome. J Mol Evol 28:32–42
• Stewart DT, Baker AJ (1994) Patterns of sequence variation in the mitochondrial D-loop region of shrews. Mol Biol Evol 11:9–21
• Taberlet P, Fumagalli L, Hausser J (1994) Chromosomal versus mitochondrial DNA evolution: tracking the evolutionary history of the southwestern European populations of the Sorex araneus group (Mammalia, Insectivora). Evolution 48:623–636
• Taberlet P, Swenson JE, Sandegren F, Bjärvall A (1995) Localisation of a contact zone between highly divergent mitochondrial DNA lineages of the brown bear Ursus arctos in Scandinavia. Conserv Biol 9:1255–1261. doi:10.​1046/​j.​1523-1739.​1995.​951255.​x
• Taberlet P, Fumagalli L, Wust-Saucy A-G, Cossons J-F (1998) Comparative phylogeography and postglacial recolonisation routes in Europe. Mol Ecol 7:453–464
• Tajima F (1983) Evolutionary relationship of DNA sequences in finite populations. Genetics 105:437–460
• Tajima F (1989) Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123:585–595
• Tegelström H, Jaarola M (1998) Geographic localization of a contact zone between bank voles (Clethrionomys glareolus) with distinctly different mitochondrial DNA. Acta Theriol 43:175–183
• Willis KJ, Rudner E, Sümegi P (2000) The full-glacial forests of central and southeastern Europe. Quat Res 53:203–213. doi:10.​1006/​qres.​1999.​2119
• Wójcik JM (1993) Chromosome races of the common shrew Sorex araneus in Poland: a model of karyotype evolution. Acta Theriol 38:315–338
• Wójcik JM, Ratkiewicz M, Searle JB (2002) Evolution of the common shrew Sorex araneus: chromosomal and molecular aspects. Acta Theriol 47(suppl 1):139–167
• Wójcik JM, Borodin PM, Fedyk S, Fredga K, Hausser J, Mishta A, Orlov VN, Searle JB, Volobouev VT, Zima J (2003) The list of chromosome races of the common shrew Sorex araneus (updated 2002). Mammalia 68:169–178. doi:10.​1515/​mamm.​2003.​67.​2.​169,/​/​2003
• Zhdanova NS, Karamisheva TV, Minina J, Astakhova NM, Lansdorp P, Kammori M, Rubtsov NB, Searle JB (2005) Unusual distribution pattern of telomeric repeats in the shrews Sorex araneus and Sorex granarius. Chromosome Res 13:617–625. doi:10.​1007/​s10577-005-0988-3

Identyfikatory

DOI

10.1007/s13364-010-0022-9