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2016 | 56 | 4 |

Tytuł artykułu

Rapid evolutionary dynamics of the Pepino mosaic virus - status and future perspectives

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EN

Abstrakty

EN
Pepino mosaic virus (PepMV) has emerged as an important pathogen of greenhouse tomato crops and is currently distributed worldwide. Population genetic studies have revealed a shift in the dominant PepMV genotype from European (EU) to Chilean 2 (CH2) in North America and several European countries. New genetic variants are constantly being created by mutation and recombination events. Single nucleotide substitutions in different parts of the genome were found to affect on development of symptoms resulting in new pathotypes and accumulation of viral RNA. The variability of the PepMV population has a great impact on designing specific diagnostic tools and developing efficient and durable strategies of disease control. In this paper we review the current knowledge about the PepMV population, the evolutionary dynamics of this highly infective virus, methods for its detection and plant protection strategies.

Wydawca

-

Rocznik

Tom

56

Numer

4

Opis fizyczny

p.337-345,fig.,ref.

Twórcy

autor
  • Department of Virology and Bacteriology, Institute of Plant Protection - National Research Institute, Wladyslawa Wegorka 20, 60-318 Poznan, Poland
  • Department of Virology and Bacteriology, Institute of Plant Protection - National Research Institute, Wladyslawa Wegorka 20, 60-318 Poznan, Poland
  • Department of Virology and Bacteriology, Institute of Plant Protection - National Research Institute, Wladyslawa Wegorka 20, 60-318 Poznan, Poland
  • Department of Virology and Bacteriology, Institute of Plant Protection - National Research Institute, Wladyslawa Wegorka 20, 60-318 Poznan, Poland
autor
  • De Ceuster Meststoffen Corporation, Bannerlaan 79, 2280 Grobbendonk, Belgium

Bibliografia

  • Aguilar J.M., Hernández-Gallardo M.D., Cenis J.L., Lacasa A., Aranda M.A. 2002. Complete sequence of the Pepino mosaic virus RNA genome. Archive of Virology 147 (10): 2009–2015.
  • Alfaro-Fernández A., Córdoba-Sellés M.C., Herrera-Vásquez J.A., Cebrián M.C., Jordá C. 2009. Transmission of Pepino mosaic virus by the fungal vector Olpidium virulentus. Journal of Phytopathology 158 (4): 217–226.
  • Alfaro-Fernández A., Medina V., Córdoba-Sellés M.C., Font M.I., Jornet J., Cebrián M.C. Jordá C. 2010. Ultrastructural aspects of tomato leaves infected by Tomato torrado virus (ToTV) and coinfected by other viruses. Plant Pathology 59 (2): 231-239.
  • Andino R., Domingo E. 2015. Viral quasi-species. Virology 479-480: 46–51.
  • Aparicio F., Thomas C.L., Lederer C., Niu Y., Wang D.W., Maule A.J. 2005. Virus induction of heat shock protein 70 reflects a general response to protein accumulation in the plant cytosol. Plant Physiology 138: 529–536.
  • Blystad R.D., van der Vlugt R., Alfaro-Fernández A., Córdoba M.C., Bese G., Hristova D., Pospieszny H., Mehle N., Ravnikar M., Tomassoli L., Varveri C., Nielsen S.L. 2015. Host range and symptomatology of Pepino mosaic virus strains occurring in Europe. European Journal of Plant Pathology 143 (1): 43-56.
  • Bol J.F. 2008. Role of capsid proteins. p. 21–31. In: “Plant Virology Protocols: From Viral Sequence to Protein Function” (G.D. Foster, I.E. Johansen, Y. Hong, P.D. Nagy, eds.). Methods in Molecular Biology, Humana Press, 677 pp.
  • Bukau B., Horwich A.L. 1998. The HSP70 and HSP60 chaperone machines. Cell 92: 351–366.
  • Callaway A., Giesman-Cookmeyer D., Gillock E.T., Sit T.L.,Lommel S.A. 2001. The multifunctional capsid proteins of plant RNA viruses. Annual Review of Phytopathology 39: 419–460.
  • Carrington J.C., Kasschau K.D., Mahajan S.K., Schaad M.C. 1996. Cell-to-cell and long-distance transport of viruses in plants. Plant Cell 8: 1669–1681.
  • Chen Z.R., Zhou T., Wu X.H., Hong Y., Fan Z.F., Li H.F. 2008. Influence of cytoplasmic heat shock protein 70 on viral infection of Nicotiana benthamiana. Molecular Plant Pathology 9 (6): 809–817.
  • Córdoba-Sellés M.C., García-Rández A., Alfaro-Fernández A.,Jordá-Gutiérrez C. 2007. Seed transmission of Pepino mosaic virus and efficacy of tomato seed disinfection treatments. Plant Disease 91 (10): 1250–1254.
  • Cotillon A.C., Girard M., Ducouret S. 2002. Complete nucleotide sequence of the genomic RNA of a French isolate of Pepino mosaic virus. Archives of Virology 147 (11): 2231–2238.
  • Domingo E., Sheldon J., Perales C. 2012. Viral quasispecies evolution. Microbiology and Molecular Biology Review 76 (2): 159–216.
  • Duff-Farrier C.R., Bailey A.M., Boonham N., Foster G.D. 2015. A pathogenicity determinant maps to the N-terminal coat protein region of the Pepino mosaic virus genome. Molecular Plant Pathology 16 (3): 308–315.
  • Duffy S., Shackelton L.A., Holmes E.C. 2008. Rates of evolutionary change in viruses: patterns and determinants. Nature Review Genetics 9 (4): 267–276.
  • EPPO (European Plant Protection Organization). 2009. EPPO alert list-viruses. Pepino mosaic potexvirus-a new virus of tomato introduced into Europe. Available on: www.eppo.org/QUARANTINE/Alert_List/alert_list.htm[Accessed: 10 September 2016]
  • Fletcher J.T. 1978. The use of avirulent virus strain to protect plants against the effects of virulent strains. Annals of Aplied Biology 89: 110–114.
  • French C.J., Bouthillier M., Bernardy M., Ferguson G., Sabourin M., Johnson R.C., Masters C., Godkin S., Mumford R. 2001. First report of Pepino mosaic virus in Canada and the United States. Plant Disease 85 (10): 1121.
  • Gómez P., Sempere R.N., Elena S.F., Aranda M.A. 2009. Mixed infections of Pepino mosaic virus strains modulate the evolutionary dynamics of this emergent virus. Journal of Virology 83 (23): 12378–12387.
  • Gómez P., Sempere R.N., Aranda M.A., Elena S.F. 2012. Phylodynamics of Pepino mosaic virus in Spain. European Journal of Plant Pathology 134 (3): 445–449.
  • Gutiérrez-Aguirre I., Mehle N., Delíc D., Gruden K., Mumford R., Ravnikar M. 2009. Real-time quantitative PCR based sensitive detection and strain discrimination of Pepino mosaic virus . Journal of Virological Methods 162 (1–2): 46–55.
  • Hanssen I.M., Paeleman A., Wittemans L., Goen K., Lievens B., Bragard C., Vanachter A.C.R.C., Thomma B.P.H.J. 2008. Genetic characterization of Pepino mosaic virus isolates from Belgian greenhouse tomatoes reveals genetic recombination. European Journal Plant Pathology 121 (2): 131–146.
  • Hanssen I.M., Paeleman A., Vandewoestijne E., Van Bergen L., Bragard C., Lievens B., Vanachter A.C.R.C., Thomma B.P.H.J. 2009. Pepino mosaic virus isolates and differential symptomatology in tomato. Plant Pathology 58 (3): 450–460.
  • Hanssen I.M., Mumford R., Blystad D.G., Cortez I., Hasiów-Jaroszewska B., Hristova D., Pagán I., Pereira A.M., Peters J., Pospieszny H., Ravnikar M., Stijger I., Tomassoli L., Varveri C., van der Vlugt R., Nielsen S.L. 2010a. Seed transmission of Pepino mosaic virus in tomato. European Journal of Plant Pathology 126: 145-152.
  • Hanssen I.M., Gutiérrez-Aguirre I., Paeleman A., Goen K., Wittemans L., Lievens B., Vanachter A.C.R.C., Ravnikar M., Thomma B.P.H.J. 2010b. Cross-protection or enhanced symptom display in greenhouse tomato co-infected with different Pepino mosaic virus isolates. Plant Pathology 59 (1): 13-21.
  • Hanssen I.M., Thomma B.P.H.J. 2010. Pepino mosaic virus: a successful pathogen that rapidly evolved from emerging to endemic in tomato crops. Molecular Plant Pathology 11 (2): 179–189.
  • Hasiów B., Borodynko N., Pospieszny H. 2008. Complete genomic RNA sequence of the Polish Pepino mosaic virus isolate belonging to the US2 strain. Virus Genes 36 (1): 1–8.
  • Hasiów-Jaroszewska B., Pospieszny H., Borodynko N. 2009. New necrotic isolates of Pepino mosaic virus representing the CH2 genotype. Journal of Phytopathology 157 (7–8): 494–496.
  • Hasiów-Jaroszewska B., Jackowiak P., Borodynko N., Figlerowicz M., Pospieszny H. 2010a. Quasispecies nature of Pepino mosaic virus and its evolutionary dynamics. Virus Genes 41 (2): 260–267.
  • Hasiów-Jaroszewska B., Kuzniar A., Peters S.A., Leunissen J.A., Pospieszny H. 2010b. Evidence for RNA recombination between distinct isolates of Pepino mosaic virus. Acta Biochimica Polonica 57 (3): 385–388.
  • Hasiów-Jaroszewska B., Borodynko N., Jackowiak P., Figlerowicz M., Pospieszny H. 2011. Single mutation converts mild pathotype of the Pepino mosaic virus into necrotic one. Virus Research 159 (1): 57–61.
  • Hasiów-Jaroszewska B., Borodynko N. 2012. Characterization of the necrosis determinants of the European genotype of Pepino mosaic virus by site specific mutagenesis of an infectious cDNA clone. Archives of Virology 157 (2): 337–341.
  • Hasiów-Jaroszewska B., Borodynko N. 2013. Detection of Pepino mosaic virus isolates from tomato by one-step reverse transcription loop-mediated isothermal amplification. Archives of Virology 158 (10): 2153–2156.
  • Hasiów-Jaroszewska B., Komorowska B. 2013. A new method for detection and discrimination of Pepino mosaic virus isolates using high resolution melting analysis of the triple gene block 3. Journal of Virological Methods 193 (1): 1–5.
  • Hasiów-Jaroszewska B., Paeleman A., Ortega-Parra N., Borodynko N., Minicka J., Czerwoniec A., Thomma B.P.H.J., Hanssen I.M. 2013. Ratio of mutated versus wild-type coat protein sequences in Pepino mosaic virus determines the nature and severity of yellowing symptoms on tomato plants. Molecular Plant Pathology 14 (9): 923-933. .
  • Hasiów-Jaroszewska B., Minicka J., Pospieszny H. 2014. Crossprotection between different pathotypes of Pepino mosaic virus representing Chilean 2 genotype. Acta Scientiarum Polonorum, Hortorum Cultus 13 (5): 177–185.
  • Jones R.A.C., Koenig R., Lesemann D.E. 1980. Pepino mosaic virus, a new potexvirus from pepino (Solanum muricatum). Annals of Applied Biology 94 (1): 61–68.
  • Lan P., Yeh W.B., Tsai C.W., Lin N.S. 2010. A unique glycine-rich motif at the N-terminal region of Bamboo mosaic virus coat protein is required for symptom expression. Molecular Plant-Microbe Interaction 23 (7): 903–914.
  • Leisner S.M., Turgeon R., Howell S.H. 1992. Long distance movement of cauliflower mosaic virus in infected turnip plants. Molecular Plant-Microbe Interactions 5 (1): 41–47.
  • Ling K.S. 2007. Molecular characterization of two Pepino mosaic virus variants from imported tomato seed reveals high levels of sequence identity between Chilean and US isolates. Virus Genes 34 (1): 1–8.
  • Ling K.S., Wechter W.P., Jordan R. 2007. Development of a onestep immunocapture real-time TaqMan RT-PCR assay for the broad spectrum detection of Pepino mosaic virus. Journal of Virological Methods 144 (1–2): 65–72.
  • Ling K.S. 2008. Pepino mosaic virus on tomato seed: virus location and mechanical transmission. Plant Disease 92 (12): 1701–1705.
  • Ling K.S., Li R., Bledsoe M. 2013. Pepino mosaic virus genotype shift in North America and development of a loop-mediated isothermal amplification for rapid genotype identification. Virology Journal 10: 117.
  • Maroon-Lango C.J., Guaragna M.A., Jordan R.L., Hammond J., Bandla M., Marquardt S.K. 2005. Two unique US isolates of Pepino mosaic virus from a limited source of pooled tomato tissue are distinct from a third (European-like) US isolate. Archives of Virology 150 (6): 1187–1201.
  • Mathioudakis M.M., Veigar R., Ghita M., Tsikou D., Medina V., Canto T., Makris A.M., Livieratos I.C. 2012. Pepino mosaic virus capsid protein interacts with a tomato heat shock protein cognate 70. Virus Research 163 (1): 28–39.
  • Mayer M.P., Bukau B. 2005. Hsp70 chaperones: cellular functions and molecular mechanism Cellular and Molecular. Life Sciences 62 (6): 670–684.
  • Medina V., Pinner M.S., Bedford I.D., Achon M.A., Gemeno C., Markham P.G. 2006. Immunolocalization of Tomato yellow leaf curl sardinia virus in natural host plants and its vector Bemisia tabaci. Journal of Plant Pathology 88 (3): 299–308.
  • Mehle N., Gutierrez-Aguirre I., Prezelj N., Delić D., Vidic U., Ravnikar M. 2014. Survival and transmission of Potato virus Y, Pepino mosaic virus, and Potato spindle tuber viroid in water. Applied and Environmental Microbiology 80 (4): 1455–1462.
  • Minicka J., Otulak K., Garbaczewska G., Pospieszny H., Hasiów-Jaroszewska B. 2015a. Ultrastructural insights into tomato infections caused by three different pathotypes of Pepino mosaic virus and immunolocalization of viral coat proteins. Micron 79: 84–92.
  • Minicka J., Rymelska N., Elena S.F., Czerwoniec A., Hasiów-Jaroszewska B. 2015b. Molecular evolution of Pepino mosaic virus during long-term passaging in different hosts and its impact on virus virulence. Annals of Applied Biology 166: 389–401.
  • Moreno-Pérez M.G., Pagán I., Aragón-Caballero L., Cáceres F., Fraile A., García-Arenala F. 2014. Ecological and genetic determinants of Pepino mosaic virus emergence. Journal of Virology 8 (6): 3359–3368.
  • Morozov S.Y., Solovyev A.G. 2003. Triple gene block: modular design of a multifunctional machine for plant virus movement. Journal of General Virology 84 (6): 1351–1366.
  • Mumford R.A., Metcalfe E.J. 2001. The partial sequencing of genomic RNA of a UK isolate of Pepino mosaic virus and the comparison of the coat protein sequence with other isolates from Europe and Peru. Archives of Virology 146 (12): 2455–2460.
  • Nagy P.D., Wang R.Y., Pogany J., Hafrén A., Mäkinen K. 2011. Emerging picture of host chaperone and cyclophilin roles in RNA virus replication. Virology 411 (2): 374–382.
  • Noël P., Hance T., Bragard A.C. 2014. Transmission of the Pepino mosaic virus by whitefly. European Journal of Plant Pathology 138 (1): 23–27.
  • Ortega-Parra N., Hasiów-Jaroszewska B., Borodynko N., Paeleman A., Hanssen I.M. 2016a. Single nucleotide polymorphisms in the coat protein of PepMV are responsible for yellowing pathotypes in tomato crops. In: Proceedings of the 13th International Plant Virus Epidemiology Symposium, Avignon, France, 6-10 June 2016, 122 pp.
  • Ortega-Parra N., Wittemans L., Moerkens R. 2016b. Pepino mosaic virus vaccination: from basic research to large-scale application. In: Proceedings of the International Tomato Conference, 13-15 April 2016, Antwerp, Belgium.
  • Oshima N. 1975. The control of tomato mosaic disease with attenuated virus of tomato strain of TMV. Review of Plant Protection Research 8: 126–135.
  • Owor B., Legg J.P., Okao-Okuja G., Obonyo R., Kyamanywa S., Ogenga-Latigo M.W. 2004. Field studies of cross protection with cassava mosaic geminiviruses in Uganda. Journal of Phytopathology 152 (4): 243–249.
  • Pagán I., Córdoba-Sellés M.C., Martínez-Priego L., Fraile A., Malpica J.M., Jordá C., García-Arenal F. 2006. Genetic structure of the population of Pepino mosaic virus infecting tomato crops in Spain. Phytopathology 96 (3): 274–279.
  • Peng J., Shi M., Xia Z., Huang J., Fan Z. 2012. Detection of cucumber mosaic virus isolates from banana by one-step reverse transcription loop-mediated isothermal amplification. Archives of Virology 157 (11): 2213–2217.
  • Pita J.S., de Miranda J.R., Schneider W.L., Roossinck M.J. 2007. Environment determines fidelity for an RNA virus replicase. Journal of Virology 81 (17): 9072–9077.
  • Pospieszny H., Palczewska M., Borodynko N. 2003. First record of Pepino mosaic virus in Poland. Journal of Plant Disease and Protection 100: 97.
  • Pospieszny H., Borodynko N. 2006. New Polish isolate of Pepino mosaic virus highly distinct from European Tomato, Peruvian, and US2 strains. Plant Disease 90 (8): 1106.
  • Pospieszny H., Hasiów B., Borodynko N. 2008. Characterization of two distinct Polish isolates of Pepino mosaic virus. European Journal of Plant Pathology 122 (3): 443–445.
  • Pospieszny H., Budziszewska M., Hasiów-Jaroszewska B., Obrępalska-Stęplowska A., Borodynko N. 2010. Biological and molecular characterization of Polish isolates of Tomato torrado virus. Journal of Phytopathology 158 (1): 56–62.
  • Pospieszny H., Hasiów-Jaroszewska B., Borodynko N. 2011. Nowy patotyp szczepu CH2 wirusa mozaiki pepino (Pepino mosaic virus) [New pathotype of CH2 strain of Pepino mosaic virus ]. Progress in Plant Protection/Postępy w Ochronie Roślin 51 (4): 1644–1648.
  • Rast A.T.B. 1972. MII–16, an artificial symptomless mutant of tobacco mosaic virus for seedling inoculation of tomato crops. Netherlands Journal of Plant Pathology 78: 110–112.
  • Roberts A.G., Cruz S.S., Roberts I.M., Prior D.A.M., Turgeon R., Oparka K.J. 1997. Phloem unloading in sink leaves of Nicotiana benthamiana: comparison of a fluorescent solute with a fluorescent virus. Plant Cell 9 (8): 1381–1396.
  • Rodríguez-Cerezo E., García-Arenal F. 1989. Genetic heterogeneity of the RNA genome population of the plant virus U5–TMV. Virology 170 (2): 418–423.
  • Roggero P., Masenga V., Lenzi R., Coghe F., Ena S., Winter S. 2001. First report of Pepino mosaic virus in tomato in Italy. Plant Pathology 50 (6): 798–800.
  • Schwarz D., Beuch U., Bandte M., Fakhro A., Büttner C., Obermeier C. 2010. Spread and interaction of Pepino mosaic virus (PepMV) and Pythium aphanidermatum in a closed nutrient solution recirculation system: effects on tomato growth and yield. Plant Pathology 59 (3): 443–452.
  • Sempere R.N., Gómez-Aix C., Ruíz-Ramón F., Gómez P., Hasiów-Jaroszewska B., Sánchez-Pina M.A., Aranda M.A. 2016. Pepino mosaic virus RNA-dependent RNA polymerase pol domain is a hypersensitive response-like elicitor shared by necrotic and mild isolates. Phytopathology 106 (4): 395–406.
  • Shipp J.L., Buitenhuis R., Stobbs L., Wang K., Kim W.S., Ferguson G. 2008. Vectoring of Pepino mosaic virus by bumble-bees in tomato greenhouses. Annals of Applied Biology 153 (2): 149–155.
  • Spence N.J., Basham J., Mumford R.A., Hayman G., Edmondson R., Jones D.R. 2006. Effect of Pepino mosaic virus on the yield and quality of glasshouse-grown tomatoes in the UK. Plant Pathology 55: 595–606.
  • Sung D.Y., Kaplan F., Guy C. 2001. Plant Hsp70 molecular chaperones: protein structure, gene family, expression and function. Physiologia Plantarum 113 (4): 443–451.
  • Tiberini A., Davino S., Davino M., Tomassoli L. 2011. Complete sequence, genotyping and comparative analysis of Pepino mosaic virus isolates from Italy. Journal of Plant Pathology 93 (2): 437–442.
  • Verchot-Lubicz J. 2005. A new cell-to-cell transport model for potexviruses. Molecular Plant-Microbe Interactions 18 (4): 283–290.
  • Villemson S., Hunt R., Jarvekulg L. 2003. Pepino mosaic virus – new dangerous pathogen for tomato and potato. Plant Protection and Quarantine 11: 37–40.
  • van del Vlugt R.A.A., Stijger C.C.M.M., Verhoeven J.T.H.J., Lesemann D.E. 2000. First report of Pepino mosaic virus on tomato. Plant Disease 84 (1): 103.
  • Vozárová Z., Kamencayová M., Glasa M., Šubr Z. 2013. Plum pox virus accumulations in different genome parts during a long-term maintenance in Prunus host plants and passage in Nicotiana benthamiana. Acta Virologica 57 (3): 369–372.
  • Wallis C.M., Stone A.L., Sherman D.J., Damsteegt V.D., Gildow F.E., Schneider W.L. 2007. Adaptation of Plum pox virus to a herbaceous host (Pisum sativum) following serial passages. Journal of General Virology 88 (10): 2839–2845.
  • Wan J., Cabanillas D.G., Zheng H., Laliberté J.F. 2015. Turnip mosaic virus moves systemically through both phloem and xylem as membrane-associated complexes. Plant Physiology 167 (4): 1374–1388.
  • Wang R.Y., Stork J., Nagy P.D. 2009. A key role for heat shock protein 70 in the localization and insertion of tombusvirus replication proteins to intercellular membranes. Journal of Virology 83 (7): 3276–3287.
  • Wang H.L., Yeh S.D., Chiu R.J., Gonsalves D. 1987. Effectiveness of cross-protection by mild mutants of papaya ringspot virus for control of ringspot disease of papaya in Taiwan. Plant Disease 71 (6): 491–497.
  • Whitham S.A., Quan S., Chang H.S., Cooper B., Estes B., Zhu T., Wang X., Hou Y.M. 2003. Diverse RNA viruses elicit the expression of common sets of genes in susceptible Arabidopsis thaliana plants. Plant Journal 33 (2): 271–283.
  • Wright D., Mumford R. 1999. Pepino mosaic Potexvirus (PepMV): First Records in Tomato in the United Kingdom. Plant Disease Notes, 89. Central Science Laboratory, York, UK.
  • Zielinska L., Byczyk J., Rymelska N., Borodynko N., Pospieszny H., Hasiów-Jaroszewska B. 2012. Cytopathology of Tomato torrado virus infection in tomato and Nicotiana benthamiana. Journal of Phytopathology 160 (11–12): 685-689.
  • Zong X., Wang W., Wei H., Wang J., Chen X., Xu L., Zhu D., Tan Y., Liu Q. 2014. Rapid detection of Prunus necrotic ringspot virus using magnetic nanoparticle-assisted reverse transcription loop-mediated isothermal amplification. Journal of Virological Methods 208: 85–89.

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