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2013 | 31 | 3 |

Tytuł artykułu

Unique variations of SRY gene result in distinct patrilineal phylogeny of Capra hircus and other domestic Bovidae

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
Patrilineal phylogeny of Beichuan White goat and other domestic Bovidae was inferred from 5´-UTR and coding region of SRY gene. Variation analysis revealed 208 variable sites, meanwhile, a 50-bp fragment inserted downstream of the initiation codon (ATG) of SRY genes modified the translational initiation process in Bos and Bubalus, while the mechanism of what should be explained in a further study. Amino acid sequence alignments of HMG-box region indicated a high degree of conservation among goats and other Bovidae. All the sequences of Bovidae clustered into Bos,Bubalus and Capra. Bos indicus, Bos taurus, Bos javanicus, Bos frontalis, Bos grunniens and Bison bonasus were comprised in genus Bos, while Bubalus bubalis and Syncerus caffer belonged to genus Bubalus. Beichuan white goats and other Capra hircus specimens were clustered into genus Capra.Patrilineal phylogeny of Bovidae exhibited a discrepancy from the earlier matrilineal analysis.

Wydawca

-

Rocznik

Tom

31

Numer

3

Opis fizyczny

p.219-227,fig.,ref.

Twórcy

autor
  • School of Life Science and Engineering, Southwest University of Science and Technology, Mianyang, Sichuan 621010, China
autor
  • Department of Agronomy, Dezhou University, Dezhou, Shandong 253023, China
autor
  • College of Life Science and Technology, Southwest University for Nationalities, Chengdu 610041, China

Bibliografia

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  • CAI X., CHEN H., LEI C., WANG S., XUE K., ZHANG B., 2007 – mtDNA diversity and genetic lineages of eighteen cattle breeds from Bos taurus and Bos indicus in China. Genetica 131, 175-183.
  • CHENG H.H., SHI H.F., ZHOU R.J., GUO Y.Q., LIU L., LIU J.D., JIANG Y., KUDO T., SUTOU S., 2001 – Characterization of Bovidae sex-determing gene SRY. Genetics Selection Evolution 33,687-694.
  • FELSENSTEIN J., 1988 – Phylogenies from molecular sequences: inference and reliability. Annual Review of Genetics 22, 521-565.
  • HASSANIN A., DOUZERY E.J.P., 1999 – Evolutionary affinities of the enigmatic saola (Pseudoryx nghetinhensis) in the context of the molecular phylogeny of Bovidae. Proceedings of the Rogal Society B 266, 893-900.
  • HAWKINS J.R., TAYLOR A., BERTA P., LEVILLIERS J., VAN DER AUWERA B., GOODFELLOW P.N., 1992 – Mutational analysis of SRY: nonsense and missense mutations in XY sex reversal.Human Genetics 88, 471-474.
  • KUMAR S., DUDLEY J., NEI M., TAMURA K., 2008 – MEGA: A biologist-centric software for evolutionary analysis of DNA and protein sequences. Briefings in Bioinformatics 9, 299-306.
  • MCELREAVEY K.D., VILAIN E., BOUCEKKINE C., VIDAUD M., JAUBERT F., RICHAUD F.,FELLOUS M., 1992 – XY sex reversal associated with a nonsense mutation in SRY. Genomics 13,838-840.
  • NAGAI K., 2001 – Molecular evolution of Sry and Sox gene. Gene 270, 161-169.
  • PANYEN E.J., COTINOT C.Y., 1993 – Comparative HMG-box sequences of the SRY gene between sheep, cattle and goats. Nucleic Acids Research 21, 2772.
  • SAITOU N., NEI M., 1987 – The neighbor-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology Evolution 4, 406-425.
  • THOMPSON J.D., GIBSON T.J., PLEWNIAK F., JEANMOUGIN F., HIGGENS D.G., 1997 – The Clustal X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tool. Nucleic Acids Research 25, 4876-4882.
  • WRIGHT J.M., DIXON G.H., 1988 – Induction by torsional stress of an altered DNA conformation 5’ upstream of the gene for a high mobility group protein from trout and specific binding to flanking sequences by the gene product HMG-T. Biochemistry 27, 576-681.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

bwmeta1.element.agro-2b6e4902-7134-4f76-a1cd-383e51f3fca5
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